This tool currently only works with ENCODE data from genome builds hg16 or hg17.

Note: If you do not wish to mask a set of intervals, change the Use Mask option to No, this option will override any Mask files selected.

Syntax

This tool will attempt to create a random set of intervals that mimic those found within your source file. You may also specify a set of intervals to mask.

Allow overlaps options

• Across Strands - random regions are allowed to overlap only if they are on different strands.
• Any - all overlaps are allowed.
• None - no overlapping regions are allowed.

Regions to use options

• Bounding region of interest based on the dataset build.